Download MendeleyCrystal Structure of a Short Chain Dehydrogenase from Brucella melitensis
Dranow, D.M., Edwards, T.E., Lorimer, D.To be published.
4NIM
Crystal Structure of a Short Chain Dehydrogenase from Brucella melitensis
- PDB DOI: https://doi.org/10.2210/pdb4NIM/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Brucella melitensis ATCC 23457
- Mutation(s): No
- Deposited: 2013-11-06 Released: 2013-11-20
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.186
- R-Value Work: 0.154
- R-Value Observed: 0.156
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Versicolorin reductase | 277 | Brucella melitensis ATCC 23457 | Mutation(s): 0 Gene Names: BMEA_A1386 |  | |
UniProt | |||||
Find proteins for C0RJU5 (Brucella melitensis biotype 2 (strain ATCC 23457)) Explore C0RJU5 Go to UniProtKB: C0RJU5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C0RJU5 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EDO Query on EDO | B [auth A], C [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.186
- R-Value Work: 0.154
- R-Value Observed: 0.156
- Space Group: I 41 2 2
- Diffraction Data: https://doi.org/10.18430/M34NIM
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 118.21 | α = 90 |
| b = 118.21 | β = 90 |
| c = 85.18 | γ = 90 |
| Software Name | Purpose |
|---|---|
| XSCALE | data scaling |
| PHASER | phasing |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
Entry History
Deposition Data
- Released Date: 2013-11-20 Deposition Author(s): Dranow, D.M., Edwards, T.E., Lorimer, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Revision History (Full details and data files)
- Version 1.0: 2013-11-20
Type: Initial release - Version 1.1: 2014-02-26
Changes: Structure summary - Version 1.2: 2015-09-16
Changes: Other, Structure summary - Version 1.3: 2017-11-22
Changes: Refinement description - Version 1.4: 2023-09-20
Changes: Data collection, Database references, Derived calculations, Refinement description
