Download MendeleyCrystal Structure of Engineered Protein OR422.
Vorobiev, S., Su, M., Bjelic, S., Kipnis, Y., Wang, L., Sahdev, S., Xiao, R., Maglaqui, M., Kogan, S., Baker, D., Everett, J.K., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L.To be published.
4LNY
Crystal Structure of Engineered Protein, Northeast Structural Genomics Consortium Target OR422
- PDB DOI: https://doi.org/10.2210/pdb4LNY/pdb
- Classification: DE NOVO PROTEIN
- Organism(s): synthetic construct
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2013-07-12 Released: 2013-08-07
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.93 Å
- R-Value Free: 0.222
- R-Value Work: 0.191
- R-Value Observed: 0.192
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Engineered Protein OR422 | 259 | synthetic construct | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for Q06121 (Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)) Explore Q06121 Go to UniProtKB: Q06121 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q06121 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CD Query on CD | B [auth A] C [auth A] D [auth A] E [auth A] F [auth A] | CADMIUM ION Cd WLZRMCYVCSSEQC-UHFFFAOYSA-N |  | ||
| CL Query on CL | H [auth A], I [auth A], J [auth A], K [auth A], L [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.93 Å
- R-Value Free: 0.222
- R-Value Work: 0.191
- R-Value Observed: 0.192
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 41.125 | α = 90 |
| b = 63.161 | β = 90 |
| c = 86.436 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| ADSC | data collection |
| XDS | data reduction |
| RAPD | data scaling |
| BALBES | phasing |
Entry History
Deposition Data
- Released Date: 2013-08-07 Deposition Author(s): Vorobiev, S., Su, M., Bjelic, S., Kipnis, Y., Wang, L., Sahdev, S., Xiao, R., Maglaqui, M., Kogan, S., Baker, D., Everett, J.K., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
Revision History (Full details and data files)
- Version 1.0: 2013-08-07
Type: Initial release - Version 1.1: 2023-09-20
Changes: Data collection, Database references, Derived calculations, Refinement description - Version 1.2: 2023-12-06
Changes: Data collection
