Download MendeleyCrystal structure of mouse galectin-1
Rustiguel, J.K., Trabuco, A.C., Del Cistia Andrade, C., Stowell, S.R., Cummings, R.D., Dias-Baruffi, M., Nonato, M.C.To be published.
4LBQ
Crystal structure of mouse galectin-1
- PDB DOI: https://doi.org/10.2210/pdb4LBQ/pdb
- Classification: SUGAR BINDING PROTEIN
- Organism(s): Mus musculus
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2013-06-20 Released: 2014-07-02
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.238
- R-Value Work: 0.186
- R-Value Observed: 0.188
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Galectin-1 | 135 | Mus musculus | Mutation(s): 0 Gene Names: Gbp, Lgals1 |  | |
UniProt | |||||
Find proteins for P16045 (Mus musculus) Explore P16045 Go to UniProtKB: P16045 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P16045 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Galectin-1 | 135 | Mus musculus | Mutation(s): 0 Gene Names: Gbp, Lgals1 |  | |
UniProt | |||||
Find proteins for P16045 (Mus musculus) Explore P16045 Go to UniProtKB: P16045 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P16045 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Galectin-1 | 135 | Mus musculus | Mutation(s): 0 Gene Names: Gbp, Lgals1 |  | |
UniProt | |||||
Find proteins for P16045 (Mus musculus) Explore P16045 Go to UniProtKB: P16045 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P16045 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GOL Query on GOL | E [auth A], F [auth B], G [auth C], H [auth D] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| CSO Query on CSO | A | L-PEPTIDE LINKING | C3 H7 N O3 S |  | CYS |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.238
- R-Value Work: 0.186
- R-Value Observed: 0.188
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 110.04 | α = 90 |
| b = 38.2 | β = 112.71 |
| c = 130.18 | γ = 90 |
| Software Name | Purpose |
|---|---|
| MAR345dtb | data collection |
| PHENIX | model building |
| PHENIX | refinement |
| MOSFLM | data reduction |
| SCALA | data scaling |
| PHENIX | phasing |
Entry History
Deposition Data
- Released Date: 2014-07-02 Deposition Author(s): Rustiguel, J.K., Trabuco, A.C., Del Cistia Andrade, C., Stowell, S.R., Cummings, R.D., Dias-Baruffi, M., Nonato, M.C.
Revision History (Full details and data files)
- Version 1.0: 2014-07-02
Type: Initial release - Version 1.1: 2017-11-15
Changes: Refinement description - Version 1.2: 2023-09-20
Changes: Data collection, Database references, Derived calculations, Refinement description - Version 1.3: 2023-12-06
Changes: Data collection
