Download MendeleyStructure of DNA-binding domain of the response regulator SaeR from Staphylococcus epidermidis
Chen, Y.R., Chen, S.C., Yang, C.S., Kuan, S.M., Liu, Y.H., Chen, Y.To be published.
4IXA
Structure of DNA-binding domain of the response regulator SaeR from Staphylococcus epidermidis
- PDB DOI: https://doi.org/10.2210/pdb4IXA/pdb
- Classification: TRANSCRIPTION
- Organism(s): Staphylococcus epidermidis ATCC 12228
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2013-01-24 Released: 2014-01-29
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.15 Å
- R-Value Free: 0.262
- R-Value Work: 0.203
- R-Value Observed: 0.206
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Response regulator SaeR | 110 | Staphylococcus epidermidis ATCC 12228 | Mutation(s): 1 Gene Names: saeR, SE_0479 |  | |
UniProt | |||||
Find proteins for Q8CQ17 (Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)) Explore Q8CQ17 Go to UniProtKB: Q8CQ17 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8CQ17 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.15 Å
- R-Value Free: 0.262
- R-Value Work: 0.203
- R-Value Observed: 0.206
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 34.201 | α = 90 |
| b = 53.784 | β = 90 |
| c = 111.658 | γ = 90 |
| Software Name | Purpose |
|---|---|
| HKL-2000 | data collection |
| PHASER | phasing |
| PHENIX | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2014-01-29 Deposition Author(s): Chen, Y.R., Chen, S.C., Yang, C.S., Kuan, S.M., Liu, Y.H., Chen, Y.
Revision History (Full details and data files)
- Version 1.0: 2014-01-29
Type: Initial release - Version 1.1: 2024-03-20
Changes: Data collection, Database references
