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Crystal structure of the RRM domain of RNA helicase HERA from T. thermophilus in complex with GGGC RNA
DOI:10.2210/pdb4i67/pdb   NDB ID: NA2153
4I67
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/rna
    Structure Weight: 10953.94
    Molecule: Heat resistant RNA dependent ATPase
    Polymer: 1 Type: protein Length: 87
    Chains: A
    EC#: 3.6.4.13   
    Fragment: RRM domain (UNP residues 431-517)
    Organism: Thermus thermophilus
    Gene Name: TT_C1895
    UniProtKB: Protein Feature View | Search PDB | Q72GF3  
    Molecule: 5'-R(P*GP*GP*GP*(RPC))-3'
    Polymer: 2 Type: rna Length: 4
    Chains: B
    Details: 23S ribosomal RNA fragment
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Thermus thermophilus   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    3I31   
    4I68   
    4I69   
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    RPC
    Search 
    RPC C9 H15 N3 O11 P2 C rnaLinking
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA2153
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Rudolph, M.G.,  Klostermeier, D.

    Deposition:   2012-11-29
    Release:   2013-04-24
    Last Modified (REVDAT):   2013-07-17
     
  •   Revision History    Hide
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    2013-07-17
    Citation
    2013-05-15
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.33
    R-Value: 0.179 (obs.)
    R-Free: 0.234
    Space Group: P 61
    Unit Cell:
      Length [Å] Angles [°]
    a = 88.43 α = 90.00 
    b = 88.43 β = 90.00 
    c = 28.94 γ = 120.00