Download MendeleyStructure of UDP-N-acetylglucosamine 2-epimerase from Rickettsia bellii
Seattle Structural Genomics Center for Infectious Disease (SSGCID), Abendroth, J., Sankaran, B., Davies, D.R., Edwards, T.E., Staker, B.L.To be published.
4HWG
Structure of UDP-N-acetylglucosamine 2-epimerase from Rickettsia bellii
- PDB DOI: https://doi.org/10.2210/pdb4HWG/pdb
- Classification: ISOMERASE
- Organism(s): Rickettsia bellii RML369-C
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2012-11-07 Released: 2012-11-28
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.182
- R-Value Work: 0.148
- R-Value Observed: 0.150
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| UDP-N-acetylglucosamine 2-epimerase | 385 | Rickettsia bellii RML369-C | Mutation(s): 0 Gene Names: RBE_0708, rffE EC: 5.1.3.14 |  | |
UniProt | |||||
Find proteins for Q1RIM5 (Rickettsia bellii (strain RML369-C)) Explore Q1RIM5 Go to UniProtKB: Q1RIM5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q1RIM5 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PO4 Query on PO4 | B [auth A] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.182
- R-Value Work: 0.148
- R-Value Observed: 0.150
- Space Group: H 3 2
- Diffraction Data: https://doi.org/10.18430/M34HWG
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 146.71 | α = 90 |
| b = 146.71 | β = 90 |
| c = 106.25 | γ = 120 |
| Software Name | Purpose |
|---|---|
| XSCALE | data scaling |
| PHASER | phasing |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| BOS | data collection |
| XDS | data reduction |
Entry History
Deposition Data
- Released Date: 2012-11-28 Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Revision History (Full details and data files)
- Version 1.0: 2012-11-28
Type: Initial release - Version 1.1: 2023-09-20
Changes: Data collection, Database references, Derived calculations, Refinement description
