Download MendeleyStructure of the complex of three phase partition treated lipase from Thermomyces lanuginosa with 16-hydroxypalmitic acid at 2.4 A resolution
Kumar, M., Sinha, M., Mukherjee, J., Gupta, M.N., Kaur, P., Sharma, S., Singh, T.P.To be published.
4GI1
Structure of the complex of three phase partition treated lipase from Thermomyces lanuginosa with 16-hydroxypalmitic acid at 2.4 A resolution
- PDB DOI: https://doi.org/10.2210/pdb4GI1/pdb
- Classification: HYDROLASE
- Organism(s): Thermomyces lanuginosus
- Mutation(s): No
- Deposited: 2012-08-08 Released: 2012-09-05
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.43 Å
- R-Value Free: 0.205
- R-Value Work: 0.163
- R-Value Observed: 0.165
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Lipase | 269 | Thermomyces lanuginosus | Mutation(s): 0 EC: 3.1.1.3 |  | |
UniProt | |||||
Find proteins for O59952 (Thermomyces lanuginosus) Explore O59952 Go to UniProtKB: O59952 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O59952 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| 16Y Query on 16Y | D [auth A], F [auth B] | 16-hydroxyhexadecanoic acid C16 H32 O3 UGAGPNKCDRTDHP-UHFFFAOYSA-N |  | ||
| GOL Query on GOL | C [auth A], E [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.43 Å
- R-Value Free: 0.205
- R-Value Work: 0.163
- R-Value Observed: 0.165
- Space Group: P 61
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 140.837 | α = 90 |
| b = 140.837 | β = 90 |
| c = 80.577 | γ = 120 |
| Software Name | Purpose |
|---|---|
| HKL-2000 | data collection |
| AMoRE | phasing |
| REFMAC | refinement |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
Entry History
Deposition Data
- Released Date: 2012-09-05 Deposition Author(s): Kumar, M., Sinha, M., Mukherjee, J., Gupta, M.N., Kaur, P., Sharma, S., Singh, T.P.
Revision History (Full details and data files)
- Version 1.0: 2012-09-05
Type: Initial release - Version 1.1: 2023-11-08
Changes: Data collection, Database references, Derived calculations, Refinement description
