4FI5

Crystal structure of the N-terminal domain of Hantaan virus strain 76-118 nucleoprotein

PDB DOI: https://doi.org/10.2210/pdb4FI5/pdb

Classification: VIRAL PROTEIN
Organism(s): Hantaan virus 76-118
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2012-06-07 Released: 2012-06-20
Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.20 Å
R-Value Free: 0.235
R-Value Work: 0.192
R-Value Observed: 0.196

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of the N-terminal domain of Hantaan virus strain 76-118 nucleoprotein

Edwards, T.E., Abendroth, J., Altamura, L., Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published.

Macromolecule Content

Total Structure Weight: 12.83 kDa
Atom Count: 645
Modelled Residue Count: 71
Deposited Residue Count: 113
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Nucleoprotein	A	113	Hantaan virus 76-118	Mutation(s): 0 Gene Names: N
UniProt
Find proteins for P05133 (Hantaan virus (strain 76-118)) Explore P05133 Go to UniProtKB: P05133
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P05133
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.20 Å
R-Value Free: 0.235
R-Value Work: 0.192
R-Value Observed: 0.196
Space Group: P 3₂ 2 1
Diffraction Data: https://doi.org/10.18430/M34FI5

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 77.4	α = 90
b = 77.4	β = 90
c = 36.52	γ = 120

Software Package:

Software Name	Purpose
XSCALE	data scaling
PHASER	phasing
REFMAC	refinement
PDB_EXTRACT	data extraction
XDS	data reduction

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2012-06-20

Deposition Author(s):

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Revision History (Full details and data files)

Version 1.0: 2012-06-20
Type: Initial release
Version 1.1: 2023-09-13
Changes: Data collection, Database references, Refinement description

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.