4DS2

Ubiquitin conjugating enzyme (putative) from Trypanosoma cruzi

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.63 Å
  • R-Value Free: 0.273 
  • R-Value Work: 0.229 
  • R-Value Observed: 0.231 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history. 


Literature

Ubiquitin conjugating enzyme (putative) from Trypanosoma cruzi

Merritt, E.A., Arakaki, T., Napuli, A., Van Voorhis, W.C., Buckner, F.S., Fan, E., Zucker, F., Verlinde, L.M.J., Kim, J., Hol, W.G.J.

To be published.

Macromolecules
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Ubiquitin-conjugating enzyme E2, putative
A, B
167Trypanosoma cruziMutation(s): 0 
Gene Names: Tc00.1047053506635.90, TcCLB.506635.90
UniProt
Find proteins for Q4DIQ3 (Trypanosoma cruzi (strain CL Brener))
Explore Q4DIQ3 
Go to UniProtKB:  Q4DIQ3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ4DIQ3
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.63 Å
  • R-Value Free: 0.273 
  • R-Value Work: 0.229 
  • R-Value Observed: 0.231 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 60.139α = 90
b = 70.376β = 90
c = 99.117γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
BALBESphasing

Structure Validation

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View more in-depth experimental data
Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2012-02-29
    Type: Initial release
  • Version 1.1: 2017-11-15
    Changes: Refinement description
  • Version 1.2: 2024-02-28
    Changes: Data collection, Database references, Refinement description