Download MendeleyTranspeptidase domain of FtsI4 D,D-transpeptidase from Legionella pneumophila.
CUFF, M., OSIPIUK, J., WU, R., ENDRES, M., JOACHIMIAK, A., Midwest Center for Structural Genomics (MCSG)To be published.
4ZTK
Transpeptidase domain of FtsI4 D,D-transpeptidase from Legionella pneumophila.
- PDB DOI: https://doi.org/10.2210/pdb4ZTK/pdb
- Classification: Transferase, Cell Cycle
- Organism(s): Legionella pneumophila subsp. pneumophila ATCC 43290
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2015-05-14 Released: 2015-05-27
- Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.219
- R-Value Work: 0.167
- R-Value Observed: 0.170
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Cell division protein FtsI/penicillin binding protein 2 | 316 | Legionella pneumophila subsp. pneumophila ATCC 43290 | Mutation(s): 0 Gene Names: lp12_1557 |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NHE Query on NHE | B [auth A] | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID C8 H17 N O3 S MKWKNSIESPFAQN-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.219
- R-Value Work: 0.167
- R-Value Observed: 0.170
- Space Group: P 21 21 21
- Diffraction Data: https://doi.org/10.18430/M34ZTK
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 47.376 | α = 90 |
| b = 72.057 | β = 90 |
| c = 75.456 | γ = 90 |
| Software Name | Purpose |
|---|---|
| HKL-3000 | data scaling |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| HKL-3000 | data reduction |
| HKL-3000 | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2015-05-27 Deposition Author(s): CUFF, M., OSIPIUK, J., WU, R., ENDRES, M., JOACHIMIAK, A., Midwest Center for Structural Genomics (MCSG)
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | GM094585 |
Revision History (Full details and data files)
- Version 1.0: 2015-05-27
Type: Initial release - Version 1.1: 2017-09-20
Changes: Author supporting evidence, Derived calculations, Source and taxonomy - Version 1.2: 2019-12-25
Changes: Author supporting evidence
