4WSX
The crystal structure of hemagglutinin from A/Jiangxi-Donghu/346/2013 influenza virus
- PDB DOI: https://doi.org/10.2210/pdb4WSX/pdb
- Classification: VIRAL PROTEIN
- Organism(s): Influenza A virus
- Expression System: Trichoplusia ni
- Mutation(s): No 
- Deposited: 2014-10-28 Released: 2015-02-25 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.266 
- R-Value Work: 0.243 
- R-Value Observed: 0.244 
This is version 1.3 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Hemagglutinin HA1 chain | 327 | Influenza A virus | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for A0A0J9X252 (Influenza A virus) Explore A0A0J9X252  Go to UniProtKB:  A0A0J9X252 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A0J9X252 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Hemagglutinin HA2 chain | 174 | Influenza A virus | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for A0A0J9X253 (Influenza A virus) Explore A0A0J9X253  Go to UniProtKB:  A0A0J9X253 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A0J9X253 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | AA [auth C] BA [auth D] CA [auth E] DA [auth F] EA [auth G] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.266 
- R-Value Work: 0.243 
- R-Value Observed: 0.244 
- Space Group: C 1 2 1
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 217.395 | α = 90 |
b = 217.612 | β = 89.98 |
c = 146.266 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
HKL-2000 | data reduction |
SCALEPACK | data scaling |
PHASER | phasing |
Entry History 
Deposition Data
- Released Date: 2015-02-25  Deposition Author(s): Yang, H., Carney, P.J., Chang, J.C., Villanueva, J.M., Stevens, J.
Revision History (Full details and data files)
- Version 1.0: 2015-02-25
Type: Initial release - Version 1.1: 2015-04-01
Changes: Database references - Version 1.2: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Database references, Derived calculations, Source and taxonomy, Structure summary - Version 1.3: 2023-12-27
Changes: Data collection, Database references, Refinement description, Structure summary