4NPX

Structure of hypothetical protein Cj0539 from Campylobacter jejuni

PDB DOI: https://doi.org/10.2210/pdb4NPX/pdb

Classification: UNKNOWN FUNCTION
Organism(s): Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2013-11-22 Released: 2014-01-01
Deposition Author(s): Filippova, E.V., Minasov, G., Shuvalova, L., Kiryukhina, O., Adkins, J.N., Endres, M., Nissen, M., Konkel, M., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.93 Å
R-Value Free: 0.270
R-Value Work: 0.187
R-Value Observed: 0.191

wwPDB Validation 3D Report Full Report

This is version 1.4 of the entry. See complete history.

Literature

Structure of hypothetical protein Cj0539 from Campylobacter jejuni

Filippova, E.V., Minasov, G., Shuvalova, L., Kiryukhina, O., Adkins, J.N., Endres, M., Nissen, M., Konkel, M., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP)

To be published.

Macromolecule Content

Total Structure Weight: 13.57 kDa
Atom Count: 674
Modelled Residue Count: 80
Deposited Residue Count: 115
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Putative uncharacterized protein	A	115	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	Mutation(s): 0 Gene Names: Cj0539
UniProt
Find proteins for Q0PAX7 (Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)) Explore Q0PAX7 Go to UniProtKB: Q0PAX7
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q0PAX7
Sequence Annotations Expand
Reference Sequence

Small Molecules

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE Query on MSE	A	L-PEPTIDE LINKING	C₅ H₁₁ N O₂ Se		MET

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.93 Å
R-Value Free: 0.270
R-Value Work: 0.187
R-Value Observed: 0.191
Space Group: P 4₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 58.606	α = 90
b = 58.606	β = 90
c = 49.808	γ = 90

Software Package:

Software Name	Purpose
Blu-Ice	data collection
HKL-3000	phasing
REFMAC	refinement
HKL-3000	data reduction
HKL-3000	data scaling

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2014-01-01

Deposition Author(s):

Filippova, E.V.

Midwest Center for Structural Genomics (MCSG)

Program for the Characterization of Secreted Effector Proteins (PCSEP)

Revision History (Full details and data files)

Version 1.0: 2014-01-01
Type: Initial release
Version 1.1: 2014-05-07
Changes: Structure summary
Version 1.2: 2014-08-13
Changes: Structure summary
Version 1.3: 2017-11-22
Changes: Refinement description
Version 1.4: 2018-01-24
Changes: Database references

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.