Download MendeleyNortheast Structural Genomics Consortium Target OR367
Guan, R., Pultz, I.S., Seetharaman, J., Kornhaber, G., Mao, L., Xiao, R., Maglaqui, M., Everett, J.K., Acton, T.B., Baker, D., Montelione, G.T.To be published.
4NE7
Crystal Structure of engineered Kumamolisin-As from Alicyclobacillus sendaiensis, Northeast Structural Genomics Consortium (NESG) Target OR367
- PDB DOI: https://doi.org/10.2210/pdb4NE7/pdb
- Classification: HYDROLASE
- Organism(s): Alicyclobacillus sendaiensis
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2013-10-28 Released: 2013-11-20
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.50 Å
- R-Value Free: 0.240
- R-Value Work: 0.198
- R-Value Observed: 0.202
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Kumamolisin-As | 384 | Alicyclobacillus sendaiensis | Mutation(s): 0 Gene Names: scpA |  | |
UniProt | |||||
Find proteins for Q8GB88 (Alicyclobacillus sendaiensis) Explore Q8GB88 Go to UniProtKB: Q8GB88 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8GB88 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ZN Query on ZN | B [auth A], C [auth A], D [auth A], E [auth A], F [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.50 Å
- R-Value Free: 0.240
- R-Value Work: 0.198
- R-Value Observed: 0.202
- Space Group: P 32 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 110.885 | α = 90 |
| b = 110.885 | β = 90 |
| c = 75.992 | γ = 120 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| MAR345dtb | data collection |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2013-11-20 Deposition Author(s): Guan, R., Pultz, I.S., Siegel, J.B., Seetharaman, J., Kornhaber, G., Maglaqui, M., Mao, L., Xiao, R., Everett, J.K., Baker, D., Montelione, G.T., Northeast Structural Genomics Consortium (NESG)
Revision History (Full details and data files)
- Version 1.0: 2013-11-20
Type: Initial release - Version 1.1: 2023-09-20
Changes: Data collection, Database references, Derived calculations, Refinement description
