Download MendeleyCrystal structure of an internal FN3 domain from human Contactin-5 [PSI-NYSGRC-005804]
Kumar, P.R., Casadevall, A., Almo, S.C.To be published.
4N68
Crystal structure of an internal FN3 domain from human Contactin-5 [PSI-NYSGRC-005804]
- PDB DOI: https://doi.org/10.2210/pdb4N68/pdb
- Classification: CELL ADHESION
- Organism(s): Homo sapiens
- Expression System: Trichoplusia ni
- Mutation(s): No
- Deposited: 2013-10-11 Released: 2013-10-30
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.219
- R-Value Work: 0.170
- R-Value Observed: 0.172
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Contactin-5 | 113 | Homo sapiens | Mutation(s): 0 Gene Names: CNTN5 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O94779 (Homo sapiens) Explore O94779 Go to UniProtKB: O94779 | |||||
PHAROS: O94779 GTEx: ENSG00000149972 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O94779 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | B [auth A], C [auth A], D [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.219
- R-Value Work: 0.170
- R-Value Observed: 0.172
- Space Group: I 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 34.49 | α = 90 |
| b = 46.41 | β = 98.35 |
| c = 55.294 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SCALA | data scaling |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| CBASS | data collection |
| MOSFLM | data reduction |
| PHENIX | phasing |
Entry History
Deposition Data
- Released Date: 2013-10-30 Deposition Author(s): Kumar, P.R., Banu, R., Bhosle, R., Calarese, D.A., Celikgil, A., Chamala, S., Chan, M.K., Chowdhury, S., Fiser, A., Garforth, S.J., Glenn, A.S., Hillerich, B., Khafizov, K., Attonito, J., Love, J.D., Patel, H., Patel, R., Seidel, R.D., Smith, B., Stead, M., Toro, R., Casadevall, A., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Revision History (Full details and data files)
- Version 1.0: 2013-10-30
Type: Initial release - Version 1.1: 2023-09-20
Changes: Data collection, Database references, Derived calculations, Refinement description
