4KWM
Structure of a/anhui/5/2005 h5 ha
- PDB DOI: https://doi.org/10.2210/pdb4KWM/pdb
- Classification: VIRAL PROTEIN
- Organism(s): Influenza A virus (A/chicken/Anhui/1089/2007(H5N1))
- Expression System: Trichoplusia ni
- Mutation(s): No
- Deposited: 2013-05-24 Released: 2014-06-25
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.247
- R-Value Work: 0.208
- R-Value Observed: 0.210
This is version 1.1 of the entry. See complete history.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hemagglutinin | 329 | Influenza A virus (A/chicken/Anhui/1089/2007(H5N1)) | Mutation(s): 0 Gene Names: HA |  | |
UniProt | |||||
Find proteins for C0LYC6 (Influenza A virus) Explore C0LYC6 Go to UniProtKB: C0LYC6 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C0LYC6 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hemagglutinin | 174 | Influenza A virus (A/chicken/Anhui/1089/2007(H5N1)) | Mutation(s): 0 Gene Names: HA |  | |
UniProt | |||||
Find proteins for C0LYC6 (Influenza A virus) Explore C0LYC6 Go to UniProtKB: C0LYC6 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C0LYC6 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAG Query on NAG | G [auth A], H [auth B], I [auth D], J [auth E] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.247
- R-Value Work: 0.208
- R-Value Observed: 0.210
- Space Group: P 3
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 114.372 | α = 90 |
| b = 114.372 | β = 90 |
| c = 134.89 | γ = 120 |
| Software Name | Purpose |
|---|---|
| HKL-2000 | data collection |
| PHASER | phasing |
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2014-06-25 Deposition Author(s): Yang, H., Shore, D.A., Carney, P.J., Chang, J.C., Stevens, J.
Revision History (Full details and data files)
- Version 1.0: 2014-06-25
Type: Initial release - Version 1.1: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Advisory, Data collection, Database references, Derived calculations, Structure summary
