Download MendeleyThe crystal structure of a possible leucine/isoleucine/valine-binding protein from Rhodopirellula baltica SH 1
Tan, K., Mack, J., Endres, M., Joachimiak, A.To be published.
4KV7
The crystal structure of a possible leucine/isoleucine/valine-binding protein from Rhodopirellula baltica SH 1
- PDB DOI: https://doi.org/10.2210/pdb4KV7/pdb
- Classification: UNKNOWN FUNCTION
- Organism(s): Rhodopirellula baltica SH 1
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2013-05-22 Released: 2013-06-05
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.20 Å
- R-Value Free: 0.163
- R-Value Work: 0.148
- R-Value Observed: 0.149
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Probable leucine/isoleucine/valine-binding protein | 381 | Rhodopirellula baltica SH 1 | Mutation(s): 1 Gene Names: livK, RB7306 |  | |
UniProt | |||||
Find proteins for Q7UNW4 (Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1)) Explore Q7UNW4 Go to UniProtKB: Q7UNW4 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q7UNW4 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| FMT Query on FMT | B [auth A] | FORMIC ACID C H2 O2 BDAGIHXWWSANSR-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.20 Å
- R-Value Free: 0.163
- R-Value Work: 0.148
- R-Value Observed: 0.149
- Space Group: P 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 37.984 | α = 76.22 |
| b = 44.483 | β = 88.65 |
| c = 57.913 | γ = 77.54 |
| Software Name | Purpose |
|---|---|
| SBC-Collect | data collection |
| SHELXD | phasing |
| MLPHARE | phasing |
| DM | model building |
| ARP | model building |
| WARP | model building |
| HKL-3000 | phasing |
| PHENIX | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| DM | phasing |
Entry History
Deposition Data
- Released Date: 2013-06-05 Deposition Author(s): Tan, K., Mack, J., Endres, M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2013-06-05
Type: Initial release
