4JOQ

Putative ribose ABC transporter, periplasmic solute-binding protein from Rhodobacter sphaeroides


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.90 Å
  • R-Value Free: 0.142 
  • R-Value Work: 0.125 
  • R-Value Observed: 0.126 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Putative ribose ABC transporter, periplasmic solute-binding protein from Rhodobacter sphaeroides.

Osipiuk, J.Tesar, C.Endres, M.Joachimiak, A.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
ABC ribose transporter, periplasmic solute-binding protein
A, B
297Cereibacter sphaeroides ATCC 17025Mutation(s): 2 
Gene Names: RbsBRsph17025_2685
UniProt
Find proteins for A4WW08 (Cereibacter sphaeroides (strain ATCC 17025 / ATH 2.4.3))
Explore A4WW08 
Go to UniProtKB:  A4WW08
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA4WW08
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 86.096α = 90
b = 86.096β = 90
c = 199.986γ = 120
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
SBC-Collectdata collection
HKL-3000data reduction
HKL-3000data scaling
PHENIXphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2013-04-10
    Type: Initial release
  • Version 1.1: 2017-11-15
    Changes: Refinement description