4IQN

Crystal structure of uncharacterized protein from Salmonella enterica subsp. enterica serovar typhimurium str. 14028s

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.196 
  • R-Value Work: 0.135 
  • R-Value Observed: 0.138 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history. 


Literature

Crystal structure of uncharacterized protein from salmonella enterica subsp. enterica serovar typhimurium str. 14028s

Chang, C., Hatzos-Skintges, C., Adkins, J.N., Brown, R.N., Cort, J.R., Heffron, F., Nakayasu, E.S., Jedrzejczak, R., Joachimiak, A.

To be published.

Macromolecules
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(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Putative cytoplasmic protein225Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SMutation(s): 0 
UniProt
Find proteins for A0A0F6B4U8 (Salmonella typhimurium (strain 14028s / SGSC 2262))
Explore A0A0F6B4U8 
Go to UniProtKB:  A0A0F6B4U8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0F6B4U8
Sequence Annotations
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  • Reference Sequence
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(by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Putative cytoplasmic protein225Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SMutation(s): 0 
UniProt
Find proteins for A0A0F6B4U8 (Salmonella typhimurium (strain 14028s / SGSC 2262))
Explore A0A0F6B4U8 
Go to UniProtKB:  A0A0F6B4U8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0F6B4U8
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Putative cytoplasmic protein225Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SMutation(s): 0 
UniProt
Find proteins for A0A0F6B4U8 (Salmonella typhimurium (strain 14028s / SGSC 2262))
Explore A0A0F6B4U8 
Go to UniProtKB:  A0A0F6B4U8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0F6B4U8
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
PG4
Query on PG4
Download Ideal Coordinates CCD File 
E [auth C]TETRAETHYLENE GLYCOL
C8 H18 O5
UWHCKJMYHZGTIT-UHFFFAOYSA-N
PEG
Query on PEG
Download Ideal Coordinates CCD File 
D [auth B]DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
Modified Residues  3 Unique
IDChains TypeFormula2D DiagramParent
MLY
Query on MLY
A
L-PEPTIDE LINKINGC8 H18 N2 O2LYS
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
MLZ
Query on MLZ
C
L-PEPTIDE LINKINGC7 H16 N2 O2LYS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.196 
  • R-Value Work: 0.135 
  • R-Value Observed: 0.138 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 62.138α = 90
b = 95.477β = 109.66
c = 69.897γ = 90
Software Package:
Software NamePurpose
SBC-Collectdata collection
MLPHAREphasing
DMmodel building
SHELXDEphasing
RESOLVEmodel building
ARP/wARPmodel building
Cootmodel building
REFMACrefinement
HKL-3000data reduction
HKL-3000data scaling
DMphasing
RESOLVEphasing

Structure Validation

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View more in-depth experimental data
Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2013-01-23
    Type: Initial release
  • Version 1.1: 2013-03-20
    Changes: Structure summary
  • Version 1.2: 2017-11-15
    Changes: Refinement description