Download MendeleyLmo2764 protein, a putative N-acetylmannosamine kinase, from Listeria monocytogenes.
Osipiuk, J., Mack, J., Endres, M., Salazar, J., Zhang, W., Joachimiak, A.To be published.
4HTL
Lmo2764 protein, a putative N-acetylmannosamine kinase, from Listeria monocytogenes
- PDB DOI: https://doi.org/10.2210/pdb4HTL/pdb
- Classification: TRANSFERASE
- Organism(s): Listeria monocytogenes EGD-e
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2012-11-01 Released: 2012-11-14
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.64 Å
- R-Value Free: 0.169
- R-Value Work: 0.128
- R-Value Observed: 0.130
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Beta-glucoside kinase | 297 | Listeria monocytogenes EGD-e | Mutation(s): 0 Gene Names: bglK, lmo2764 EC: 2.7.1.85 |  | |
UniProt | |||||
Find proteins for Q8Y3R9 (Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)) Explore Q8Y3R9 Go to UniProtKB: Q8Y3R9 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8Y3R9 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EDO Query on EDO | B [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.64 Å
- R-Value Free: 0.169
- R-Value Work: 0.128
- R-Value Observed: 0.130
- Space Group: F 2 2 2
- Diffraction Data: https://doi.org/10.18430/M34HTL
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 87.694 | α = 90 |
| b = 121.989 | β = 90 |
| c = 153.297 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| SBC-Collect | data collection |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| SHELXD | phasing |
| MLPHARE | phasing |
| DM | phasing |
| SOLVE | phasing |
| RESOLVE | phasing |
| HKL-3000 | phasing |
Entry History
Deposition Data
- Released Date: 2012-11-14 Deposition Author(s): Osipiuk, J., Mack, J., Endres, M., Salazar, J., Zhang, W., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2012-11-14
Type: Initial release - Version 1.1: 2017-11-15
Changes: Refinement description
