4H32
The crystal structure of the hemagglutinin H17 derived the bat influenza A virus
- PDB DOI: https://doi.org/10.2210/pdb4H32/pdb
- Classification: VIRAL PROTEIN
- Organism(s): Influenza A virus (A/little yellow-shouldered bat/Guatemala/060/2010(H17N10))
- Expression System: Spodoptera frugiperda
- Mutation(s): No 
- Deposited: 2012-09-13 Released: 2013-07-10 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.263 
- R-Value Work: 0.217 
- R-Value Observed: 0.219 
This is version 1.1 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Hemagglutinin | 320 | Influenza A virus (A/little yellow-shouldered bat/Guatemala/060/2010(H17N10)) | Mutation(s): 0  Gene Names: HA | ||
UniProt | |||||
Find proteins for H6QM93 (Influenza A virus) Explore H6QM93  Go to UniProtKB:  H6QM93 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | H6QM93 | ||||
Sequence AnnotationsExpand | |||||
|
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Hemagglutinin | 171 | Influenza A virus (A/little yellow-shouldered bat/Guatemala/060/2010(H17N10)) | Mutation(s): 0  Gene Names: HA | ||
UniProt | |||||
Find proteins for H6QM93 (Influenza A virus) Explore H6QM93  Go to UniProtKB:  H6QM93 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | H6QM93 | ||||
Sequence AnnotationsExpand | |||||
|
Small Molecules
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | M [auth A] N [auth A] O [auth C] P [auth E] Q [auth G] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.263 
- R-Value Work: 0.217 
- R-Value Observed: 0.219 
- Space Group: P 21 21 21
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 74.149 | α = 90 |
b = 101.84 | β = 90 |
c = 497.091 | γ = 90 |
Software Name | Purpose |
---|---|
ADSC | data collection |
PHASES | phasing |
PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
Entry History 
Deposition Data
Revision History (Full details and data files)
- Version 1.0: 2013-07-10
Type: Initial release - Version 1.1: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Database references, Derived calculations, Structure summary