Download MendeleyN-terminal domain of stress-induced protein-1 (STI-1) from C.elegans
Osipiuk, J., Bigelow, L., Gu, M., Van Oosten-Hawle, P., Morimoto, R.I., Joachimiak, A.To be published.
4GCN
N-terminal domain of stress-induced protein-1 (STI-1) from C.elegans
- PDB DOI: https://doi.org/10.2210/pdb4GCN/pdb
- Classification: PROTEIN BINDING
- Organism(s): Caenorhabditis elegans
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2012-07-30 Released: 2012-08-15
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.85 Å
- R-Value Free: 0.233
- R-Value Work: 0.178
- R-Value Observed: 0.180
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Protein STI-1 | 127 | Caenorhabditis elegans | Mutation(s): 0 Gene Names: CELE_R09E12.3, sti-1 |  | |
UniProt | |||||
Find proteins for O16259 (Caenorhabditis elegans) Explore O16259 Go to UniProtKB: O16259 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O16259 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PGE Query on PGE | C [auth B] | TRIETHYLENE GLYCOL C6 H14 O4 ZIBGPFATKBEMQZ-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.85 Å
- R-Value Free: 0.233
- R-Value Work: 0.178
- R-Value Observed: 0.180
- Space Group: P 21 21 21
- Diffraction Data: https://doi.org/10.18430/M34GCN
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 37.212 | α = 90 |
| b = 64.199 | β = 90 |
| c = 124.933 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| SBC-Collect | data collection |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| SHELXD | phasing |
| MLPHARE | phasing |
| DM | phasing |
| SOLVE | phasing |
| RESOLVE | phasing |
| HKL-3000 | phasing |
Entry History
Deposition Data
- Released Date: 2012-08-15 Deposition Author(s): Osipiuk, J., Bigelow, L., Gu, M., Van Oosten-Hawle, P., Morimoto, R.I., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2012-08-15
Type: Initial release - Version 1.1: 2017-11-15
Changes: Refinement description - Version 1.2: 2024-02-28
Changes: Data collection, Database references, Derived calculations
