Download MendeleyCRYSTAL STRUCTURE OF putative Nitroreductase from Geobacter metallireducens GS-15
Malashkevich, V.N., Bhosle, R., Toro, R., Seidel, R., Almo, S.C.To be published.
4DN2
CRYSTAL STRUCTURE OF putative Nitroreductase from Geobacter metallireducens GS-15
- PDB DOI: https://doi.org/10.2210/pdb4DN2/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Geobacter metallireducens GS-15
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2012-02-08 Released: 2012-02-22
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.50 Å
- R-Value Free: 0.194
- R-Value Work: 0.152
- R-Value Observed: 0.154
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Nitroreductase | 208 | Geobacter metallireducens GS-15 | Mutation(s): 0 Gene Names: ABB33053.1, Gmet_2835 |  | |
UniProt | |||||
Find proteins for Q39RS1 (Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15)) Explore Q39RS1 Go to UniProtKB: Q39RS1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q39RS1 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| FMN Query on FMN | C [auth A], D [auth B] | FLAVIN MONONUCLEOTIDE C17 H21 N4 O9 P FVTCRASFADXXNN-SCRDCRAPSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.50 Å
- R-Value Free: 0.194
- R-Value Work: 0.152
- R-Value Observed: 0.154
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 44.884 | α = 90 |
| b = 64.161 | β = 98.14 |
| c = 61.384 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SCALEPACK | data scaling |
| SHELX | phasing |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| CBASS | data collection |
| HKL-3000 | data reduction |
| SHELXD | phasing |
Entry History
Deposition Data
- Released Date: 2012-02-22 Deposition Author(s): Malashkevich, V.N., Bhosle, R., Toro, R., Seidel, R., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)
Revision History (Full details and data files)
- Version 1.0: 2012-02-22
Type: Initial release
