Download MendeleyCrystal structure of ABC sugar transporter (periplasmic sugar binding protein) from Legionella pneumophila
Eswaramoorthy, S., Almo, S.C., Swaminathan, S.To be published.
3ROT
Crystal structure of ABC sugar transporter (periplasmic sugar binding protein) from Legionella pneumophila
- PDB DOI: https://doi.org/10.2210/pdb3ROT/pdb
- Classification: TRANSPORT PROTEIN
- Organism(s): Legionella pneumophila subsp. pneumophila str. Philadelphia 1
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2011-04-26 Released: 2011-05-18
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.91 Å
- R-Value Free: 0.254
- R-Value Work: 0.220
- R-Value Observed: 0.220
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| ABC sugar transporter, periplasmic sugar binding protein | 297 | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 | Mutation(s): 0 Gene Names: lpg0184 |  | |
UniProt | |||||
Find proteins for Q5ZZ27 (Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)) Explore Q5ZZ27 Go to UniProtKB: Q5ZZ27 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5ZZ27 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GOL Query on GOL | C [auth A], D [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.91 Å
- R-Value Free: 0.254
- R-Value Work: 0.220
- R-Value Observed: 0.220
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 48.693 | α = 90 |
| b = 117.86 | β = 107.39 |
| c = 54.607 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CBASS | data collection |
| SHELX | model building |
| SHARP | phasing |
| CNS | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| SHELX | phasing |
Entry History
Deposition Data
- Released Date: 2011-05-18 Deposition Author(s): Eswaramoorthy, S., Almo, S.C., Swaminathan, S., New York Structural Genomics Research Consortium (NYSGRC)
Revision History (Full details and data files)
- Version 1.0: 2011-05-18
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance
