Download MendeleyCrystal Structure of 3-hydroxydecanoyl-(acyl carrier protein) dehydratase from Yersinia pestis
Zhang, R., Maltseva, N., Kwon, K., Anderson, W.F., Joachimiak, A., CSGIDTo be published.
3Q62
Crystal Structure of 3-hydroxydecanoyl-(acyl carrier protein) dehydratase from Yersinia pestis
- PDB DOI: https://doi.org/10.2210/pdb3Q62/pdb
- Classification: LYASE
- Organism(s): Yersinia pestis CO92
- Expression System: Escherichia coli BL21
- Mutation(s): No
- Deposited: 2010-12-30 Released: 2011-01-12
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.40 Å
- R-Value Free: 0.187
- R-Value Work: 0.149
- R-Value Observed: 0.151
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase | 175 | Yersinia pestis CO92 | Mutation(s): 0 Gene Names: fabA, YPTB1450 EC: 4.2.1.60 |  | |
UniProt | |||||
Find proteins for Q66CF3 (Yersinia pseudotuberculosis serotype I (strain IP32953)) Explore Q66CF3 Go to UniProtKB: Q66CF3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q66CF3 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MES Query on MES | C [auth A], D [auth A] | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID C6 H13 N O4 S SXGZJKUKBWWHRA-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.40 Å
- R-Value Free: 0.187
- R-Value Work: 0.149
- R-Value Observed: 0.151
- Space Group: P 21 21 21
- Diffraction Data: https://doi.org/10.18430/M33Q62
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 42.433 | α = 90 |
| b = 50.668 | β = 90 |
| c = 132.384 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SBC-Collect | data collection |
| HKL-3000 | data collection |
| HKL-3000 | phasing |
| MOLREP | phasing |
| PHENIX | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
Entry History
Deposition Data
- Released Date: 2011-01-12 Deposition Author(s): Zhang, R., Maltseva, N., Kwon, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
Revision History (Full details and data files)
- Version 1.0: 2011-01-12
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2023-09-13
Changes: Data collection, Database references, Derived calculations, Refinement description
