Download MendeleyCrystal structure of phosphoribosylglycinamide formyltransferase from Bacillus Halodurans
Patskovsky, Y., Toro, R., Foti, R., Seidel, R.D., Almo, S.C.To be published.
3P9X
Crystal structure of phosphoribosylglycinamide formyltransferase from Bacillus Halodurans
- PDB DOI: https://doi.org/10.2210/pdb3P9X/pdb
- Classification: TRANSFERASE
- Organism(s): Halalkalibacterium halodurans C-125
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2010-10-18 Released: 2011-01-19
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.226
- R-Value Work: 0.192
- R-Value Observed: 0.193
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| phosphoribosylglycinamide formyltransferase | 211 | Halalkalibacterium halodurans C-125 | Mutation(s): 0 Gene Names: PURN |  | |
UniProt | |||||
Find proteins for Q9KF54 (Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)) Explore Q9KF54 Go to UniProtKB: Q9KF54 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9KF54 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | C [auth A] D [auth A] E [auth A] F [auth A] G [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| GOL Query on GOL | H [auth A], L [auth B], M [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.226
- R-Value Work: 0.192
- R-Value Observed: 0.193
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 68.795 | α = 90 |
| b = 68.662 | β = 90 |
| c = 128.938 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHASER | phasing |
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2011-01-19 Deposition Author(s): Patskovsky, Y., Toro, R., Foti, R., Seidel, R.D., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)
Revision History (Full details and data files)
- Version 1.0: 2011-01-19
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2023-09-06
Changes: Data collection, Database references, Derived calculations, Refinement description
