3NE2
Archaeoglobus fulgidus aquaporin
- PDB DOI: https://doi.org/10.2210/pdb3NE2/pdb
- Classification: TRANSPORT PROTEIN
- Organism(s): Archaeoglobus fulgidus
- Expression System: Escherichia coli
- Mutation(s): No 
- Membrane Protein: Yes  OPMPDBTMMemProtMD
- Deposited: 2010-06-08 Released: 2010-09-22 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.00 Å
- R-Value Free: 0.274 
- R-Value Work: 0.245 
- R-Value Observed: 0.246 
This is version 1.4 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Probable aquaporin AqpM | 246 | Archaeoglobus fulgidus | Mutation(s): 0  Gene Names: aqpM, AF_1426 Membrane Entity: Yes  | ||
UniProt | |||||
Find proteins for O28846 (Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)) Explore O28846  Go to UniProtKB:  O28846 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O28846 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
BOG Query on BOG | I [auth A] J [auth A] K [auth A] L [auth D] M [auth D] | octyl beta-D-glucopyranoside C14 H28 O6 HEGSGKPQLMEBJL-RKQHYHRCSA-N |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.00 Å
- R-Value Free: 0.274 
- R-Value Work: 0.245 
- R-Value Observed: 0.246 
- Space Group: P 1 21 1
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 84.899 | α = 90 |
b = 199.861 | β = 117.51 |
c = 90.567 | γ = 90 |
Software Name | Purpose |
---|---|
DENZO | data reduction |
SCALEPACK | data scaling |
MOLREP | phasing |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
ELVES | refinement |
Entry History 
Deposition Data
- Released Date: 2010-09-22  Deposition Author(s): Lee, J.K., Finer-Moore, J.S., Stroud, R.M., Center for Structures of Membrane Proteins (CSMP)
Revision History (Full details and data files)
- Version 1.0: 2010-09-22
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2017-11-08
Changes: Refinement description - Version 1.3: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Structure summary - Version 1.4: 2023-09-06
Changes: Data collection, Database references, Refinement description, Structure summary