Crystal Structure of MHC class I HLA-A2 molecule complexed with AFP137 nonapeptide
Gras, S., Chouquet, A., Debeaupuis, E., Echasserieau, K., Saulquin, X., Bonneville, M., Housset, D.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
HLA class I histocompatibility antigen, A-2 alpha chain | 293 | Homo sapiens | Mutation(s): 1  Gene Names: HLA, HLA-A, HLAA | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P04439 (Homo sapiens) Explore P04439  Go to UniProtKB:  P04439 | |||||
PHAROS:  P04439 GTEx:  ENSG00000206503  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P04439 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Beta-2-microglobulin | 100 | Homo sapiens | Mutation(s): 0  Gene Names: B2M, BETA-2 MICROGLUBULIN, CDABP0092, HDCMA22P | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P61769 (Homo sapiens) Explore P61769  Go to UniProtKB:  P61769 | |||||
PHAROS:  P61769 GTEx:  ENSG00000166710  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P61769 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
9-meric peptide from Alpha-fetoprotein | C [auth P] | 9 | Homo sapiens | Mutation(s): 0  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P02771 (Homo sapiens) Explore P02771  Go to UniProtKB:  P02771 | |||||
PHAROS:  P02771 GTEx:  ENSG00000081051  | |||||
Entity Groups   | |||||
UniProt Group | P02771 | ||||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
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a = 51.52 | α = 90 |
b = 79.89 | β = 111.85 |
c = 55.43 | γ = 90 |
Software Name | Purpose |
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XSCALE | data scaling |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
AMoRE | phasing |