Download MendeleyCrystal structure of glutathione S-transferase from Pseudomonas fluorescens [Pf-5]
Bagaria, A., Burley, S.K., Swaminathan, S.To be published.
3M3M
Crystal structure of glutathione S-transferase from Pseudomonas fluorescens [Pf-5]
- PDB DOI: https://doi.org/10.2210/pdb3M3M/pdb
- Classification: TRANSFERASE
- Organism(s): Pseudomonas protegens Pf-5
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2010-03-09 Released: 2010-03-16
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.75 Å
- R-Value Free: 0.196
- R-Value Work: 0.159
- R-Value Observed: 0.160
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Glutathione S-transferase | 210 | Pseudomonas protegens Pf-5 | Mutation(s): 0 Gene Names: PFL_4361 EC: 2.5.1.18 |  | |
UniProt | |||||
Find proteins for Q4K8I0 (Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)) Explore Q4K8I0 Go to UniProtKB: Q4K8I0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q4K8I0 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GSH Query on GSH | B [auth A] | GLUTATHIONE C10 H17 N3 O6 S RWSXRVCMGQZWBV-WDSKDSINSA-N |  | ||
| EDO Query on EDO | D [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
| NA Query on NA | C [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.75 Å
- R-Value Free: 0.196
- R-Value Work: 0.159
- R-Value Observed: 0.160
- Space Group: P 41 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 101.746 | α = 90 |
| b = 101.746 | β = 90 |
| c = 48.88 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CBASS | data collection |
| SHARP | phasing |
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2010-03-16 Deposition Author(s): Bagaria, A., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2010-03-16
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2011-12-14
Changes: Non-polymer description - Version 1.3: 2021-02-10
Changes: Database references, Derived calculations, Structure summary
