Download MendeleyCRYSTAL STRUCTURE OF ABC SUGAR TRANSPORTER FROM Rhodobacter sphaeroides
Patskovsky, Y., Ozyurt, S., Dickey, M., Do, J., Wasserman, S.R., Sauder, J.M., Burley, S.K., Almo, S.C.To be published.
3L49
CRYSTAL STRUCTURE OF ABC SUGAR TRANSPORTER SUBUNIT FROM Rhodobacter sphaeroides 2.4.1
- PDB DOI: https://doi.org/10.2210/pdb3L49/pdb
- Classification: TRANSPORT PROTEIN
- Organism(s): Cereibacter sphaeroides 2.4.1
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2009-12-18 Released: 2010-01-05
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.254
- R-Value Work: 0.193
- R-Value Observed: 0.195
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| ABC sugar (Ribose) transporter, periplasmic substrate-binding subunit | 291 | Cereibacter sphaeroides 2.4.1 | Mutation(s): 0 Gene Names: RHOS4_09560, RSP_2365 |  | |
UniProt | |||||
Find proteins for Q3J3W0 (Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.)) Explore Q3J3W0 Go to UniProtKB: Q3J3W0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q3J3W0 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| UNL Query on UNL | E [auth A], F [auth B], G [auth C], H [auth D] | Unknown ligand | |||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.254
- R-Value Work: 0.193
- R-Value Observed: 0.195
- Space Group: P 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 67.31 | α = 106.41 |
| b = 75.712 | β = 115.49 |
| c = 77.438 | γ = 96.71 |
| Software Name | Purpose |
|---|---|
| SHELX | model building |
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| SHELX | phasing |
Entry History
Deposition Data
- Released Date: 2010-01-05 Deposition Author(s): Patskovsky, Y., Ozyurt, S., Dickey, M., Do, J., Wasserman, S.R., Sauder, J.M., Burley, S.K., Almo, S.C., New York Structural GenomiX Research Consortium (NYSGXRC), New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2010-01-05
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2018-01-24
Changes: Structure summary - Version 1.3: 2018-11-21
Changes: Data collection, Structure summary - Version 1.4: 2021-02-10
Changes: Database references, Derived calculations, Structure summary
