X-ray crystal structure of thiol peroxidase from Chromobacterium violaceum
Osipiuk, J., Kagan, O., Savchenko, A., Edwards, A.M., Joachimiak, A.To be published.
Experimental Data Snapshot
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Probable thiol peroxidase | 224 | Chromobacterium violaceum | Mutation(s): 0  Gene Names: CV_3708 EC: 1.11.1 | ||
UniProt | |||||
Find proteins for Q7NRS2 (Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)) Explore Q7NRS2  Go to UniProtKB:  Q7NRS2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q7NRS2 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | E [auth B], G [auth C] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
CL Query on CL | F [auth B], H [auth C], I [auth D] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 74.63 | α = 90 |
b = 59.387 | β = 98.3 |
c = 93.484 | γ = 90 |
Software Name | Purpose |
---|---|
DENZO | data reduction |
SCALEPACK | data scaling |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
SBC-Collect | data collection |
HKL-3000 | data reduction |
MOLREP | phasing |
HKL-3000 | phasing |