Download MendeleyThe structure of a conserved protein from Streptococcus mutans UA159.
Tan, K., Hatzos, C., Buck, K., Joachimiak, A.To be published.
3IKB
The structure of a conserved protein from Streptococcus mutans UA159.
- PDB DOI: https://doi.org/10.2210/pdb3IKB/pdb
- Classification: structural genomics, unknown function
- Organism(s): Streptococcus mutans
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2009-08-05 Released: 2009-08-18
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.67 Å
- R-Value Free: 0.214
- R-Value Work: 0.185
- R-Value Observed: 0.186
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| uncharacterized conserved protein | 198 | Streptococcus mutans | Mutation(s): 0 Gene Names: SMU_1238c, Streptococcus mutans |  | |
UniProt | |||||
Find proteins for Q8DTT5 (Streptococcus mutans serotype c (strain ATCC 700610 / UA159)) Explore Q8DTT5 Go to UniProtKB: Q8DTT5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8DTT5 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| FLC Query on FLC | C [auth A], D [auth A], E [auth B] | CITRATE ANION C6 H5 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-K |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.67 Å
- R-Value Free: 0.214
- R-Value Work: 0.185
- R-Value Observed: 0.186
- Space Group: P 43 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 66.372 | α = 90 |
| b = 66.372 | β = 90 |
| c = 197.818 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SBC-Collect | data collection |
| SHELXD | phasing |
| MLPHARE | phasing |
| DM | model building |
| ARP | model building |
| WARP | model building |
| HKL-3000 | phasing |
| REFMAC | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| DM | phasing |
Entry History
Deposition Data
- Released Date: 2009-08-18 Deposition Author(s): Tan, K., Hatzos, C., Buck, K., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2009-08-18
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance
