Download MendeleyThe crystal structure of sensory box histidine kinase/response regulator domain from Chlorobium
Ruiying, W., Shonda, C., Joachimiak, A.To be published.
3ICY
The crystal structure of sensory box histidine kinase/response regulator domain from Chlorobium tepidum TLS
- PDB DOI: https://doi.org/10.2210/pdb3ICY/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Chlorobaculum tepidum
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2009-07-19 Released: 2010-01-12
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.68 Å
- R-Value Free: 0.248
- R-Value Work: 0.167
- R-Value Observed: 0.171
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Sensor protein | 118 | Chlorobaculum tepidum | Mutation(s): 0 Gene Names: CT2060, GI:21648093 EC: 2.7.13.3 |  | |
UniProt | |||||
Find proteins for Q8KAU2 (Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS)) Explore Q8KAU2 Go to UniProtKB: Q8KAU2 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8KAU2 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GOL Query on GOL | C [auth A], D [auth A], E [auth B], F [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.68 Å
- R-Value Free: 0.248
- R-Value Work: 0.167
- R-Value Observed: 0.171
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 106.728 | α = 90 |
| b = 32.483 | β = 114.67 |
| c = 93.755 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| MLPHARE | phasing |
| REFMAC | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| HKL-3000 | data collection |
Entry History
Deposition Data
- Released Date: 2010-01-12 Deposition Author(s): Wu, R., Shonda, C., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2010-01-12
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2019-07-24
Changes: Data collection, Derived calculations, Refinement description - Version 1.3: 2024-04-03
Changes: Data collection, Database references, Derived calculations, Refinement description
