Download MendeleyCrystal structure of signal receiver domain oF HD domain-containing protein 3 FROM Pseudomonas fluorescens
Patskovsky, Y., Ramagopal, U., Toro, R., Freeman, J., Miller, S., Sauder, J.M., Burley, S.K., Almo, S.C.To be published.
3HV2
Crystal structure of signal receiver domain OF HD domain-containing protein FROM Pseudomonas fluorescens Pf-5
- PDB DOI: https://doi.org/10.2210/pdb3HV2/pdb
- Classification: SIGNALING PROTEIN
- Organism(s): Pseudomonas protegens Pf-5
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2009-06-15 Released: 2009-06-23
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.50 Å
- R-Value Free: 0.193
- R-Value Work: 0.163
- R-Value Observed: 0.164
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Response regulator/HD domain protein | 153 | Pseudomonas protegens Pf-5 | Mutation(s): 0 Gene Names: PFL_4895 |  | |
UniProt | |||||
Find proteins for Q4K707 (Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)) Explore Q4K707 Go to UniProtKB: Q4K707 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q4K707 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | C [auth A], D [auth B], E [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.50 Å
- R-Value Free: 0.193
- R-Value Work: 0.163
- R-Value Observed: 0.164
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 56.731 | α = 90 |
| b = 57.758 | β = 90 |
| c = 85.305 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SHELXD | phasing |
| REFMAC | refinement |
| DENZO | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2009-06-23 Deposition Author(s): Patskovsky, Y., Ramagopal, U., Toro, R., Freeman, J., Miller, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2009-06-23
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2018-11-21
Changes: Data collection, Structure summary - Version 1.3: 2021-02-10
Changes: Database references, Derived calculations, Structure summary - Version 1.4: 2024-02-21
Changes: Data collection, Database references
