Download MendeleyCrystal structure of the Xanthomonas axonopodis pv. citri molybdate-binding protein (ModA) mutant (K127S)
Santacruz-Perez, C., Pegos, V.R., Balan, A., Barbosa, J.A.R.G.To be published.
3GZG
Crystal structure of the Xanthomonas axonopodis pv. citri molybdate-binding protein (ModA) mutant (K127S)
- PDB DOI: https://doi.org/10.2210/pdb3GZG/pdb
- Classification: METAL BINDING PROTEIN
- Organism(s): Xanthomonas citri
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2009-04-07 Released: 2009-05-12
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.55 Å
- R-Value Free: 0.235
- R-Value Work: 0.202
- R-Value Observed: 0.203
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Molybdate-binding periplasmic protein; permease | 253 | Xanthomonas citri | Mutation(s): 1 Gene Names: modA |  | |
UniProt | |||||
Find proteins for Q8PHA1 (Xanthomonas axonopodis pv. citri (strain 306)) Explore Q8PHA1 Go to UniProtKB: Q8PHA1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8PHA1 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MOO Query on MOO | F [auth A], G [auth B], I [auth C] | MOLYBDATE ION Mo O4 MEFBJEMVZONFCJ-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | D [auth A], E [auth A], H [auth C] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.55 Å
- R-Value Free: 0.235
- R-Value Work: 0.202
- R-Value Observed: 0.203
- Space Group: C 2 2 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 67.075 | α = 90 |
| b = 171.648 | β = 90 |
| c = 113.861 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| MAR345 | data collection |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2009-05-12 Deposition Author(s): Santacruz-Perez, C., Pegos, V.R., Balan, A., Barbosa, J.A.R.G.
Revision History (Full details and data files)
- Version 1.0: 2009-05-12
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2017-11-01
Changes: Advisory, Refinement description - Version 1.3: 2021-10-13
Changes: Advisory, Database references, Derived calculations - Version 1.4: 2023-09-06
Changes: Data collection, Refinement description
