Download MendeleyCrystal structure of LacI family transcription regulator from Agrobacterium tumefaciens
Bagaria, A., Burley, S.K., Swaminathan, S.To be published.
3GV0
Crystal structure of LacI family transcription regulator from Agrobacterium tumefaciens
- PDB DOI: https://doi.org/10.2210/pdb3GV0/pdb
- Classification: TRANSCRIPTION REGULATOR
- Organism(s): Agrobacterium fabrum str. C58
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2009-03-30 Released: 2009-04-14
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 Å
- R-Value Free: 0.255
- R-Value Work: 0.198
- R-Value Observed: 0.201
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Transcriptional regulator, LacI family | 288 | Agrobacterium fabrum str. C58 | Mutation(s): 0 Gene Names: AGR_C_2807, Atu1522 |  | |
UniProt | |||||
Find proteins for Q7CZ24 (Agrobacterium fabrum (strain C58 / ATCC 33970)) Explore Q7CZ24 Go to UniProtKB: Q7CZ24 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q7CZ24 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 Å
- R-Value Free: 0.255
- R-Value Work: 0.198
- R-Value Observed: 0.201
- Space Group: P 32 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 86.71 | α = 90 |
| b = 86.71 | β = 90 |
| c = 111.224 | γ = 120 |
| Software Name | Purpose |
|---|---|
| CBASS | data collection |
| SHELXD | phasing |
| SHARP | phasing |
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2009-04-14 Deposition Author(s): Bagaria, A., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2009-04-14
Type: Initial release - Version 1.1: 2011-07-13
Changes: Source and taxonomy, Version format compliance - Version 1.2: 2021-02-10
Changes: Database references, Derived calculations, Structure summary
