Download MendeleyStructure of putative OORC subunit of 2-oxoglutarate:acceptor oxidoreductase from Campylobacter jejuni
Ramagopal, U.A., Toro, R., Miller, S., Gilmore, M., Burley, S.K., Almo, S.C.To be published.
3G2E
Structure of putative OORC subunit of 2-oxoglutarate:acceptor oxidoreductase from Campylobacter jejuni
- PDB DOI: https://doi.org/10.2210/pdb3G2E/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Campylobacter jejuni
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2009-01-31 Released: 2009-03-24
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.232
- R-Value Work: 0.183
- R-Value Observed: 0.186
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| OORC subunit of 2-oxoglutarate:acceptor oxidoreductase | 194 | Campylobacter jejuni | Mutation(s): 0 Gene Names: Cj0538, oorC |  | |
UniProt | |||||
Find proteins for Q0PAX8 (Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)) Explore Q0PAX8 Go to UniProtKB: Q0PAX8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q0PAX8 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GOL Query on GOL | E [auth C] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.232
- R-Value Work: 0.183
- R-Value Observed: 0.186
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 60.933 | α = 90 |
| b = 70.17 | β = 92.42 |
| c = 97.051 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| ADSC | data collection |
| HKL-2000 | data reduction |
| SHELXD | phasing |
| SHELXE | model building |
| CCP4 | phasing |
Entry History
Deposition Data
- Released Date: 2009-03-24 Deposition Author(s): Ramagopal, U.A., Toro, R., Miller, S., Gilmore, M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2009-03-24
Type: Initial release - Version 1.1: 2011-07-13
Changes: Non-polymer description, Version format compliance - Version 1.2: 2017-11-01
Changes: Refinement description - Version 1.3: 2021-02-10
Changes: Database references, Derived calculations, Structure summary - Version 1.4: 2024-02-21
Changes: Data collection, Database references
