Download MendeleyCRYSTAL STRUCTURE OF short chain dehydrogenase from Salmonella enterica subsp. enterica serovar Typhi str. CT18
Malashkevich, V.N., Toro, R., Sauder, J.M., Burley, S.K., Almo, S.C.To be published.
3G1T
CRYSTAL STRUCTURE OF short chain dehydrogenase from Salmonella enterica subsp. enterica serovar Typhi str. CT18
- PDB DOI: https://doi.org/10.2210/pdb3G1T/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Salmonella enterica subsp. enterica serovar Typhi
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2009-01-30 Released: 2009-02-10
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.232
- R-Value Work: 0.185
- R-Value Observed: 0.188
wwPDB Validation 3D Report Full Report
This is version 1.6 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| short chain dehydrogenase | 258 | Salmonella enterica subsp. enterica serovar Typhi | Mutation(s): 0 Gene Names: STY1333, t1630 |  | |
UniProt | |||||
Find proteins for Q8XGU5 (Salmonella typhi) Explore Q8XGU5 Go to UniProtKB: Q8XGU5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8XGU5 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MG Query on MG | B [auth A], C [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.232
- R-Value Work: 0.185
- R-Value Observed: 0.188
- Space Group: P 65 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 48.4 | α = 90 |
| b = 48.4 | β = 90 |
| c = 380.9 | γ = 120 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| SHELX | phasing |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| CBASS | data collection |
| HKL-2000 | data reduction |
| SHELXD | phasing |
Entry History
Deposition Data
- Released Date: 2009-02-10 Deposition Author(s): Malashkevich, V.N., Toro, R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2009-02-10
Type: Initial release - Version 1.1: 2011-07-13
Changes: Advisory, Refinement description, Version format compliance - Version 1.2: 2012-10-24
Changes: Structure summary - Version 1.3: 2017-11-01
Changes: Refinement description - Version 1.4: 2018-11-21
Changes: Data collection, Structure summary - Version 1.5: 2021-02-10
Changes: Database references, Derived calculations, Structure summary - Version 1.6: 2024-02-21
Changes: Data collection, Database references
