Download MendeleyCrystal structure of the CBS-domain containing protein ATU1752 from Agrobacterium tumefaciens
Singer, A.U., Brown, G., Proudfoot, M., Xu, X., Dong, A., Cui, H., Edwards, A.M., Joachimiak, A., Savchenko, A., Yakunin, A.F.To be published.
3FHM
Crystal structure of the CBS-domain containing protein ATU1752 from Agrobacterium tumefaciens
- PDB DOI: https://doi.org/10.2210/pdb3FHM/pdb
- Classification: structural genomics, unknown function, NUCLEOTIDE-BINDING PROTEIN
- Organism(s): Agrobacterium fabrum str. C58
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2008-12-09 Released: 2009-01-13
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.262
- R-Value Work: 0.195
- R-Value Observed: 0.199
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| uncharacterized protein ATU1752 | 165 | Agrobacterium fabrum str. C58 | Mutation(s): 0 Gene Names: AGR_C_3216, Atu1752 |  | |
UniProt | |||||
Find proteins for A9CIP4 (Agrobacterium fabrum (strain C58 / ATCC 33970)) Explore A9CIP4 Go to UniProtKB: A9CIP4 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A9CIP4 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAI Query on NAI | F [auth A], I [auth B], L [auth C], O [auth D] | 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE C21 H29 N7 O14 P2 BOPGDPNILDQYTO-NNYOXOHSSA-N |  | ||
| AMP Query on AMP | E [auth A], H [auth B], K [auth C], N [auth D] | ADENOSINE MONOPHOSPHATE C10 H14 N5 O7 P UDMBCSSLTHHNCD-KQYNXXCUSA-N |  | ||
| SO4 Query on SO4 | G [auth A], J [auth B], M [auth C], P [auth D] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.262
- R-Value Work: 0.195
- R-Value Observed: 0.199
- Space Group: P 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 53.247 | α = 115.21 |
| b = 58.075 | β = 106.15 |
| c = 59.056 | γ = 94.94 |
| Software Name | Purpose |
|---|---|
| HKL-3000 | data collection |
| MrBUMP | phasing |
| REFMAC | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
Entry History
Deposition Data
- Released Date: 2009-01-13 Deposition Author(s): Singer, A.U., Xu, X., Zhang, R., Cui, H., Kudritsdka, M., Edwards, A.M., Joachimiak, A., Yakunin, A.F., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2009-01-13
Type: Initial release - Version 1.1: 2011-07-13
Changes: Source and taxonomy, Version format compliance - Version 1.2: 2023-09-06
Changes: Data collection, Database references, Derived calculations, Refinement description
