3F8U
Tapasin/ERp57 heterodimer
- PDB DOI: https://doi.org/10.2210/pdb3F8U/pdb
- Classification: IMMUNE SYSTEM/ISOMERASE
- Organism(s): Homo sapiens
- Expression System: Spodoptera frugiperda
- Mutation(s): Yes 
- Deposited: 2008-11-13 Released: 2009-01-13 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.60 Å
- R-Value Free: 0.285 
- R-Value Work: 0.245 
- R-Value Observed: 0.247 
This is version 1.4 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Protein disulfide-isomerase A3ERp57 | 481 | Homo sapiens | Mutation(s): 1  Gene Names: PDIA3, ERP57, ERP60, GRP58 EC: 5.3.4.1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P30101 (Homo sapiens) Explore P30101  Go to UniProtKB:  P30101 | |||||
PHAROS:  P30101 GTEx:  ENSG00000167004  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P30101 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Tapasin | 401 | Homo sapiens | Mutation(s): 0  Gene Names: TAPBP, NGS17, TAPA | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O15533 (Homo sapiens) Explore O15533  Go to UniProtKB:  O15533 | |||||
PHAROS:  O15533 GTEx:  ENSG00000231925  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O15533 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | E [auth B], F [auth D] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.60 Å
- R-Value Free: 0.285 
- R-Value Work: 0.245 
- R-Value Observed: 0.247 
- Space Group: P 1 21 1
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 74.101 | α = 90 |
b = 72.295 | β = 94.613 |
c = 200.193 | γ = 90 |
Software Name | Purpose |
---|---|
HKL-2000 | data collection |
SHARP | phasing |
CNS | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
Entry History 
Deposition Data
- Released Date: 2009-01-13  Deposition Author(s): Dong, G., Reinisch, K.M.
Revision History (Full details and data files)
- Version 1.0: 2009-01-13
Type: Initial release - Version 1.1: 2011-07-13
Changes: Non-polymer description, Version format compliance - Version 1.2: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Structure summary - Version 1.3: 2021-10-20
Changes: Database references, Structure summary - Version 1.4: 2023-12-27
Changes: Data collection