Download MendeleyCrystal structure of galE-1 from Archaeoglobus fulgidus
Agarwal, R., Burley, S.K., Swaminathan, S.To be published.
3EHE
Crystal structure of UDP-glucose 4 epimerase (galE-1) from Archaeoglobus fulgidus
- PDB DOI: https://doi.org/10.2210/pdb3EHE/pdb
- Classification: ISOMERASE
- Organism(s): Archaeoglobus fulgidus
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2008-09-12 Released: 2008-10-14
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.87 Å
- R-Value Free: 0.287
- R-Value Work: 0.253
- R-Value Observed: 0.253
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| UDP-glucose 4-epimerase (GalE-1) | 313 | Archaeoglobus fulgidus | Mutation(s): 0 Gene Names: AF_0361 |  | |
UniProt | |||||
Find proteins for O29886 (Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)) Explore O29886 Go to UniProtKB: O29886 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O29886 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAD Query on NAD | C [auth A], D [auth B] | NICOTINAMIDE-ADENINE-DINUCLEOTIDE C21 H27 N7 O14 P2 BAWFJGJZGIEFAR-NNYOXOHSSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.87 Å
- R-Value Free: 0.287
- R-Value Work: 0.253
- R-Value Observed: 0.253
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 135.574 | α = 90 |
| b = 55.529 | β = 97.52 |
| c = 89.634 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CBASS | data collection |
| SHELXD | phasing |
| SHARP | phasing |
| ARP/wARP | model building |
| Coot | model building |
| CNS | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| SCALEPACK | data scaling |
Entry History
Deposition Data
- Released Date: 2008-10-14 Deposition Author(s): Agarwal, R., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2008-10-14
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2017-10-25
Changes: Refinement description - Version 1.3: 2021-02-10
Changes: Database references, Derived calculations, Structure summary - Version 1.4: 2024-02-21
Changes: Data collection, Database references
