Download MendeleyCrystal structure of a putative ribose operon repressor from Burkholderia thailandensis
Bonanno, J.B., Patskovsky, Y., Gilmore, M., Bain, K.T., Hu, S., Romero, R., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C.To be published.
3EGC
Crystal structure of a putative ribose operon repressor from Burkholderia thailandensis
- PDB DOI: https://doi.org/10.2210/pdb3EGC/pdb
- Classification: structural genomics, unknown function
- Organism(s): Burkholderia thailandensis E264
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2008-09-10 Released: 2008-09-30
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 Å
- R-Value Free: 0.299
- R-Value Work: 0.257
- R-Value Observed: 0.259
wwPDB Validation 3D Report Full Report
This is version 1.5 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| putative ribose operon repressor | 291 | Burkholderia thailandensis E264 | Mutation(s): 0 Gene Names: BTH_I0812 |  | |
UniProt | |||||
Find proteins for Q2T0D1 (Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)) Explore Q2T0D1 Go to UniProtKB: Q2T0D1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q2T0D1 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 Å
- R-Value Free: 0.299
- R-Value Work: 0.257
- R-Value Observed: 0.259
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 50.712 | α = 90 |
| b = 288.651 | β = 113.59 |
| c = 63.355 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SCALA | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| MAR345 | data collection |
| DENZO | data reduction |
| SHELXCD | phasing |
| SHELXE | model building |
Entry History
Deposition Data
- Released Date: 2008-09-30 Deposition Author(s): Bonanno, J.B., Patskovsky, Y., Gilmore, M., Bain, K.T., Hu, S., Romero, R., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2008-09-30
Type: Initial release - Version 1.1: 2011-07-13
Changes: Source and taxonomy, Version format compliance - Version 1.2: 2017-10-25
Changes: Refinement description - Version 1.3: 2018-11-14
Changes: Data collection, Structure summary - Version 1.4: 2021-02-10
Changes: Database references, Structure summary - Version 1.5: 2024-02-21
Changes: Data collection, Database references
