Download MendeleyCRYSTAL STRUCTURE OF of putative methyltransferase from Bacteroides vulgatus ATCC 8482
Malashkevich, v.n., Toro, R., meyer, A.J., Sauder, J.M., Burley, S.K., Almo, S.C.To be published.
3E7P
CRYSTAL STRUCTURE OF of putative methyltransferase from Bacteroides vulgatus ATCC 8482
- PDB DOI: https://doi.org/10.2210/pdb3E7P/pdb
- Classification: TRANSFERASE
- Organism(s): Phocaeicola vulgatus ATCC 8482
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2008-08-18 Released: 2008-09-02
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.217
- R-Value Work: 0.184
- R-Value Observed: 0.186
wwPDB Validation 3D Report Full Report
This is version 1.5 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Putative methyltransferase | 270 | Phocaeicola vulgatus ATCC 8482 | Mutation(s): 0 Gene Names: BVU_3255 |  | |
UniProt | |||||
Find proteins for A6L5C0 (Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154)) Explore A6L5C0 Go to UniProtKB: A6L5C0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A6L5C0 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.217
- R-Value Work: 0.184
- R-Value Observed: 0.186
- Space Group: I 2 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 55.702 | α = 90 |
| b = 103.568 | β = 90 |
| c = 132.809 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| RESOLVE | phasing |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| CBASS | data collection |
| HKL-2000 | data reduction |
| PHENIX | phasing |
Entry History
Deposition Data
- Released Date: 2008-09-02 Deposition Author(s): Malashkevich, V.N., Toro, R., Meyer, A.J., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2008-09-02
Type: Initial release - Version 1.1: 2011-07-13
Changes: Advisory, Source and taxonomy, Version format compliance - Version 1.2: 2017-10-25
Changes: Refinement description - Version 1.3: 2018-11-14
Changes: Data collection, Derived calculations, Structure summary - Version 1.4: 2021-02-10
Changes: Database references, Structure summary - Version 1.5: 2024-02-21
Changes: Data collection, Database references
