Download MendeleyCrystal Structure of Conserved Protein of Unknown Function CA_C3497 from Clostridium acetobutylicum ATCC 824.
Kim, Y., Bigelow, L., Clancy, S., Abdullah, J., Joachimiak, A.To be published.
3D0J
Crystal structure of conserved protein of unknown function CA_C3497 from Clostridium acetobutylicum ATCC 824
- PDB DOI: https://doi.org/10.2210/pdb3D0J/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Clostridium acetobutylicum ATCC 824
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2008-05-01 Released: 2008-07-01
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.53 Å
- R-Value Free: 0.184
- R-Value Work: 0.165
- R-Value Observed: 0.166
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Uncharacterized protein CA_C3497 | 140 | Clostridium acetobutylicum ATCC 824 | Mutation(s): 0 Gene Names: CA_C3497 |  | |
UniProt | |||||
Find proteins for Q97DI0 (Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)) Explore Q97DI0 Go to UniProtKB: Q97DI0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q97DI0 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GOL Query on GOL | F [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| FMT Query on FMT | B [auth A], C [auth A], D [auth A], E [auth A] | FORMIC ACID C H2 O2 BDAGIHXWWSANSR-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.53 Å
- R-Value Free: 0.184
- R-Value Work: 0.165
- R-Value Observed: 0.166
- Space Group: P 32 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 52.878 | α = 90 |
| b = 52.878 | β = 90 |
| c = 112.28 | γ = 120 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| SBC-Collect | data collection |
| HKL-3000 | data collection |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| HKL-3000 | phasing |
| MLPHARE | phasing |
| DM | phasing |
| SHELXD | phasing |
| RESOLVE | phasing |
| Coot | model building |
Entry History
Deposition Data
- Released Date: 2008-07-01 Deposition Author(s): Kim, Y., Bigelow, L., Clancy, S., Abdullah, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2008-07-01
Type: Initial release - Version 1.1: 2011-07-13
Changes: Advisory, Version format compliance
