3D01

Crystal structure of the protein Atu1372 with unknown function from Agrobacterium tumefaciens

PDB DOI: https://doi.org/10.2210/pdb3D01/pdb

Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Organism(s): Agrobacterium fabrum str. C58
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2008-04-30 Released: 2008-07-01
Deposition Author(s): Zhang, R., Xu, X., Gu, J., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.70 Å
R-Value Free: 0.214
R-Value Work: 0.179
R-Value Observed: 0.181

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

The crystal structure of the protein Atu1372 with unknown function from Agrobacterium tumefaciens.

Zhang, R., Xu, X., Gu, J., Savchenko, A., Edwards, A.M., Joachimiak, A.

To be published.

Macromolecule Content

Total Structure Weight: 210.91 kDa
Atom Count: 15,234
Modelled Residue Count: 1,888
Deposited Residue Count: 1,980
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein	A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	165	Agrobacterium fabrum str. C58	Mutation(s): 0 Gene Names: GI:17935272, AGR_C_2535, Atu1372
UniProt
Find proteins for A9CJ63 (Agrobacterium fabrum (strain C58 / ATCC 33970)) Explore A9CJ63 Go to UniProtKB: A9CJ63
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A9CJ63
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
PG5 Query on PG5 Download Ideal Coordinates CCD File SDF format, chain M [auth A] SDF format, chain O [auth C] SDF format, chain P [auth E] SDF format, chain Q [auth F] SDF format, chain S [auth H] SDF format, chain T [auth I] SDF format, chain U [auth J] SDF format, chain V [auth J] SDF format, chain W [auth K] SDF format, chain N [auth B] SDF format, chain R [auth G] SDF format, chain X [auth L] MOL2 format, chain M [auth A] MOL2 format, chain O [auth C] MOL2 format, chain P [auth E] MOL2 format, chain Q [auth F] MOL2 format, chain S [auth H] MOL2 format, chain T [auth I] MOL2 format, chain U [auth J] MOL2 format, chain V [auth J] MOL2 format, chain W [auth K] MOL2 format, chain N [auth B] MOL2 format, chain R [auth G] MOL2 format, chain X [auth L]	M [auth A] N [auth B] O [auth C] P [auth E] Q [auth F] M [auth A], N [auth B], O [auth C], P [auth E], Q [auth F], R [auth G], S [auth H], T [auth I], U [auth J], V [auth J], W [auth K], X [auth L]	1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE C₈ H₁₈ O₄ YFNKIDBQEZZDLK-UHFFFAOYSA-N		Interactions Focus chain M [auth A] Focus chain N [auth B] Focus chain O [auth C] Focus chain P [auth E] Focus chain Q [auth F] Focus chain R [auth G] Focus chain S [auth H] Focus chain T [auth I] Focus chain U [auth J] Focus chain V [auth J] Focus chain W [auth K] Focus chain X [auth L] Interactions & Density Focus chain M [auth A] Focus chain N [auth B] Focus chain O [auth C] Focus chain P [auth E] Focus chain Q [auth F] Focus chain R [auth G] Focus chain S [auth H] Focus chain T [auth I] Focus chain U [auth J] Focus chain V [auth J] Focus chain W [auth K] Focus chain X [auth L]