Download MendeleyCrystal structure of SC4828, a unique phosphatase from Streptomyces coelicolor.
Singer, A.U., Proudfoot, M., Brown, G., Xu, X., Chang, C., Zhang, H., Edwards, A.M., Joachimiak, A., Savchenko, A., Yakunin, A.F.To be published.
3CBT
Crystal structure of SC4828, a unique phosphatase from Streptomyces coelicolor
- PDB DOI: https://doi.org/10.2210/pdb3CBT/pdb
- Entry: 3CBT supersedes: 3BXT
- Classification: HYDROLASE
- Organism(s): Streptomyces coelicolor A3(2)
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2008-02-22 Released: 2008-03-25
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.215
- R-Value Work: 0.190
- R-Value Observed: 0.191
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Phosphatase SC4828 | 237 | Streptomyces coelicolor A3(2) | Mutation(s): 0 Gene Names: SCO5041, SCK7.14, SCK7.14c, gi:21223414 EC: 3.1.3.5 |  | |
UniProt | |||||
Find proteins for Q9FBN7 (Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)) Explore Q9FBN7 Go to UniProtKB: Q9FBN7 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9FBN7 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MG Query on MG | B [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
| NA Query on NA | C [auth A], D [auth A], E [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.215
- R-Value Work: 0.190
- R-Value Observed: 0.191
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 39.738 | α = 90 |
| b = 77.271 | β = 90 |
| c = 80.044 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| SBC-Collect | data collection |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| SHELXCD | phasing |
| SHELXE | model building |
Entry History
Deposition Data
- Released Date: 2008-03-25 Deposition Author(s): Singer, A.U., Xu, X., Chang, C., Zheng, H., Edwards, A.M., Joachimiak, A., Yakunin, A.F., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
- This entry supersedes: 3BXT
Revision History (Full details and data files)
- Version 1.0: 2008-03-25
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2017-10-25
Changes: Refinement description
