Download MendeleyCrystal structure of uncharacterized metallo protein from Vibrio cholerae with beta-lactamase like fold.
Minasov, G., Shuvalova, L., Brunzelle, J.S., Yang, X., Collart, F.R., Anderson, W.F.To be published.
3BV6
Crystal structure of uncharacterized metallo protein from Vibrio cholerae with beta-lactamase like fold
- PDB DOI: https://doi.org/10.2210/pdb3BV6/pdb
- Classification: HYDROLASE
- Organism(s): Vibrio cholerae O1 biovar El Tor str. N16961
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2008-01-04 Released: 2008-01-29
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.208
- R-Value Work: 0.167
- R-Value Observed: 0.169
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Metal-dependent hydrolase | 379 | Vibrio cholerae O1 biovar El Tor str. N16961 | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for Q9KMS2 (Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)) Explore Q9KMS2 Go to UniProtKB: Q9KMS2 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9KMS2 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| FE Query on FE | G [auth A] H [auth A] I [auth B] J [auth B] K [auth C] | FE (III) ION Fe VTLYFUHAOXGGBS-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.208
- R-Value Work: 0.167
- R-Value Observed: 0.169
- Space Group: P 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 83.433 | α = 99.69 |
| b = 94.839 | β = 97.9 |
| c = 94.591 | γ = 116.13 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| MAR345 | data collection |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| SHARP | phasing |
Entry History
Deposition Data
- Released Date: 2008-01-29 Deposition Author(s): Minasov, G., Shuvalova, L., Brunzelle, J.S., Yang, X., Collart, F.R., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2008-01-29
Type: Initial release - Version 1.1: 2011-07-13
Changes: Source and taxonomy, Version format compliance - Version 1.2: 2017-10-25
Changes: Refinement description - Version 1.3: 2024-02-21
Changes: Data collection, Database references, Derived calculations
