Download MendeleyCrystal Structure of the Transcription Regulator MarR from Oenococcus oeni PSU-1.
Kim, Y., Volkart, L., Gu, M., Joachimiak, A.To be published.
3BRO
Crystal structure of the transcription regulator MarR from Oenococcus oeni PSU-1
- PDB DOI: https://doi.org/10.2210/pdb3BRO/pdb
- Classification: TRANSCRIPTION REGULATOR
- Organism(s): Oenococcus oeni PSU-1
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2007-12-21 Released: 2008-01-15
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.04 Å
- R-Value Free: 0.247
- R-Value Work: 0.207
- R-Value Observed: 0.209
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Transcriptional regulator | 141 | Oenococcus oeni PSU-1 | Mutation(s): 0 Gene Names: OEOE_1854 |  | |
UniProt | |||||
Find proteins for Q04CY6 (Oenococcus oeni (strain ATCC BAA-331 / PSU-1)) Explore Q04CY6 Go to UniProtKB: Q04CY6 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q04CY6 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GOL Query on GOL | G [auth D] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| CL Query on CL | E [auth A], F [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.04 Å
- R-Value Free: 0.247
- R-Value Work: 0.207
- R-Value Observed: 0.209
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 61.489 | α = 90 |
| b = 80.426 | β = 90 |
| c = 143.257 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| SBC-Collect | data collection |
| HKL-3000 | data collection |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| HKL-3000 | phasing |
| SHELX | phasing |
| MLPHARE | phasing |
| RESOLVE | phasing |
| ARP/wARP | model building |
Entry History
Deposition Data
- Released Date: 2008-01-15 Deposition Author(s): Kim, Y., Volkart, L., Gu, M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2008-01-15
Type: Initial release - Version 1.1: 2011-07-13
Changes: Source and taxonomy, Version format compliance
