Download MendeleyCrystal structure of a regulatory protein of LacI family from the Chloroflexus aggregans.
Kumaran, D., Burley, S.K., Swaminathan, S.To be published.
3BBL
Crystal structure of a regulatory protein of LacI family from Chloroflexus aggregans
- PDB DOI: https://doi.org/10.2210/pdb3BBL/pdb
- Classification: REGULATORY PROTEIN
- Organism(s): Chloroflexus aggregans DSM 9485
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2007-11-09 Released: 2007-11-27
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 Å
- R-Value Free: 0.258
- R-Value Work: 0.240
- R-Value Observed: 0.241
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Regulatory protein of LacI family | 287 | Chloroflexus aggregans DSM 9485 | Mutation(s): 0 Gene Names: CaggDRAFT_0381 |  | |
UniProt | |||||
Find proteins for B8GD81 (Chloroflexus aggregans (strain MD-66 / DSM 9485)) Explore B8GD81 Go to UniProtKB: B8GD81 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | B8GD81 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EDO Query on EDO | B [auth A], C [auth A], D [auth A], E [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 Å
- R-Value Free: 0.258
- R-Value Work: 0.240
- R-Value Observed: 0.241
- Space Group: P 63 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 122.55 | α = 90 |
| b = 122.55 | β = 90 |
| c = 123.301 | γ = 120 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| CBASS | data collection |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| SHELXD | phasing |
| SHARP | phasing |
| ARP/wARP | model building |
Entry History
Deposition Data
- Released Date: 2007-11-27 Deposition Author(s): Kumaran, D., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2007-11-27
Type: Initial release - Version 1.1: 2011-07-13
Changes: Source and taxonomy, Version format compliance - Version 1.2: 2021-02-03
Changes: Database references, Derived calculations, Structure summary
