Download MendeleyThe crystal structure of oxidoreductase from Sinorhizobium meliloti
Zhang, Z., Almo, S.C., Swaminathan, S.To be published.
3V5N
The crystal structure of oxidoreductase from Sinorhizobium meliloti
- PDB DOI: https://doi.org/10.2210/pdb3V5N/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Sinorhizobium meliloti 1021
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2011-12-16 Released: 2012-01-04
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.252
- R-Value Work: 0.185
- R-Value Observed: 0.188
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Oxidoreductase | 417 | Sinorhizobium meliloti 1021 | Mutation(s): 0 Gene Names: R02892, SMc03161 EC: 1.1.1 |  | |
UniProt | |||||
Find proteins for Q92LX1 (Rhizobium meliloti (strain 1021)) Explore Q92LX1 Go to UniProtKB: Q92LX1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q92LX1 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.252
- R-Value Work: 0.185
- R-Value Observed: 0.188
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 107.196 | α = 90 |
| b = 77.725 | β = 113.83 |
| c = 107.733 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CBASS | data collection |
| SOLVE | phasing |
| PHENIX | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2012-01-04 Deposition Author(s): Zhang, Z., Chamala, S., Evans, B., Foti, R., Gizzi, A., Hillerich, B., Kar, A., LaFleur, J., Seidel, R., Villigas, G., Zencheck, W., Almo, S.C., Swaminathan, S., New York Structural Genomics Research Consortium (NYSGRC)
Revision History (Full details and data files)
- Version 1.0: 2012-01-04
Type: Initial release
