Download MendeleyHigh resolution crystal structure of ASCH domain from Lactobacillus crispatus JV V101
Nocek, B., Xu, X., Cui, H., Jedrzejczak, R., Edwards, A., Savchenko, A., Mabbutt, B.C., Joachimiak, A.To be published.
3S9X
High resolution crystal structure of ASCH domain from Lactobacillus crispatus JV V101
- PDB DOI: https://doi.org/10.2210/pdb3S9X/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Vibrio cholerae TMA 21
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2011-06-02 Released: 2011-07-27
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.35 Å
- R-Value Free: 0.172
- R-Value Work: 0.134
- R-Value Observed: 0.136
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| ASCH domain | 159 | Vibrio cholerae TMA 21 | Mutation(s): 0 Gene Names: VCB_002424 |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CL Query on CL | B [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.35 Å
- R-Value Free: 0.172
- R-Value Work: 0.134
- R-Value Observed: 0.136
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 35.855 | α = 90 |
| b = 39.689 | β = 90 |
| c = 128.594 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SBC-Collect | data collection |
| HKL-3000 | phasing |
| SHELX | model building |
| ARP/wARP | model building |
| MOLREP | phasing |
| REFMAC | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| SHELX | phasing |
Entry History
Deposition Data
- Released Date: 2011-07-27 Deposition Author(s): Nocek, B., Xu, X., Cui, H., Jedrzejczak, R., Edwards, A., Savchenko, A., Mabbutt, B.C., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2011-07-27
Type: Initial release
